Scripts by Category
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BeamTilt vs IS CryoARM300 (Marcus Fislage)
TuneScope (Wim Hagen)
Titan IlluminatedAreaLimits (Guenter Resch)
CLcomp_shift_angle_alignment JEOL CryoARM300 (Marcus Fislage)
Find Tilt Axis Offset (Guenter Resch)
BTandSTIGvsISmeasure CryoARM300 (Marcus Fislage)
High-Level Functions
MapGrids (Wim Hagen)
k2blackstripecheck (Wim Hagen)
Refine Eucentricity with Threshold (Guenter Resch)
Map grids (advanced) (Christian Dienemann)
Center Detail (Juha Huiskonen)
Focus Pair (Juha Huiskonen)
Restore Microscope State (Guenter Resch)
Make Grid Alas JEOL CryoARM300 (Marcus Fislage)
k3blackstripecheck (Wim Hagen)
myGetTextFile (Jaap Brink)
Wait For Drift (Juha Huiskonen)
Save Microscope State (Guenter Resch)
Center Beam (Juha Huiskonen)
Hole Pattern Directions CryoARM300 (Marcus Fislage)
User Interface
Tomography
Jensen lab FISE Calibrations (Georges Chreifi)
Fast-Incremental Single-Exposure tomography (Fabian Eisenstein)
Find Tilt Range (Martin Schorb)
Dual-Axis Tomography (Peter Kirchweger)
Quick Tomography (Martin Schorb)
Parallel cryo electron tomography (PACE-tomo) (Fabian Eisenstein)
Measure Eucentric Height Alternative (Georges Chreifi)
Grouped dose-symmetric tomography (Wim Hagen)
Jensen lab FISE (Georges Chreifi)
Pre-calibrations for FISE tomography (Fabian Eisenstein)
Dose-symmetric tomography (Wim Hagen)
PACE-tomo target selection (Fabian Eisenstein)
Single Particle
Measure Sample Thickness (Jan Rheinberger)
SPA multiple images Test Radius (Wim Hagen)
Functions for JEOL CryoARM300 (Marcus Fislage)
Measure Sample Thickness (LM) (Jan Rheinberger)
Zero Loss Settings (Jan Rheinberger)
test hole centering (Wim Hagen)
Parameters Script JEOL CryoARM (Marcus Fislage)
LD (Henning Stahlberg)
Manual Acquisition (Juha Huiskonen)
Intensity Zero (Jan Rheinberger)
Set Target for Sample Thickness (Jan Rheinberger)
SPA multiple images (Wim Hagen)
Test shots JEOL CryoARM300 (semi-automated) (Marcus Fislage)
SPA data collection on JEOL CryoARM300 (Marcus Fislage)
Parameters (Henning Stahlberg)
SPAK2aligntomap (Wim Hagen)
SPA multi-shot of changing custom patterns (shenping wu)
Tilt Pair (Juha Huiskonen)
Auto Acquire on Holey Carbon (Juha Huiskonen)
Measure Sample Thickness (ALS) (Jan Rheinberger)
Other Data Acquisition
Prepare gridsquare (set eucentric height) (Jason de la Cruz)
Continuous image acquisition (Jason de la Cruz)
CRmov (Jason de la Cruz)
Acquire image SPIRAL (Francisco Javier Chichón)
Check grid (Jason de la Cruz)
Random Grid Sampler (Guenter Resch)
Serial Section Maps (Martin Schorb)
Function Libraries
CINACronJob (Henning Stahlberg)
MyFuncs (shenping wu)
WaitForRefilling (Chen Xu)
Cycle Target Defocus (shenping wu)
CINAAutoFocus (Henning Stahlberg)