Scripts by Category
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TuneScope (Wim Hagen)- Titan IlluminatedAreaLimits (Guenter Resch)
- CLcomp_shift_angle_alignment JEOL CryoARM300 (Marcus Fislage)
- Find Tilt Axis Offset (Guenter Resch)
- BTandSTIGvsISmeasure CryoARM300 (Marcus Fislage)
- BeamTilt vs IS CryoARM300 (Marcus Fislage)
High-Level Functions
- Make Grid Alas JEOL CryoARM300 (Marcus Fislage)
- k3blackstripecheck (Wim Hagen)
- Wait For Drift (Juha Huiskonen)
- Save Microscope State (Guenter Resch)
- Map grids (advanced) (Christian Dienemann)
- Center Beam (Juha Huiskonen)
- Hole Pattern Directions CryoARM300 (Marcus Fislage)
- MapGrids (Wim Hagen)
- k2blackstripecheck (Wim Hagen)
- Refine Eucentricity with Threshold (Guenter Resch)
- Center Detail (Juha Huiskonen)
- Focus Pair (Juha Huiskonen)
- Restore Microscope State (Guenter Resch)
Tomography
- Measure Eucentric Height Alternative (Georges Chreifi)
- Grouped dose-symmetric tomography (Wim Hagen)
- PACE-tomo target selection (Fabian Eisenstein)
- Jensen lab FISE (Georges Chreifi)
- Pre-calibrations for FISE tomography (Fabian Eisenstein)
- Dose-symmetric tomography (Wim Hagen)
Parallel cryo electron tomography (PACE-tomo) (Fabian Eisenstein)- Jensen lab FISE Calibrations (Georges Chreifi)
- Fast-Incremental Single-Exposure tomography (Fabian Eisenstein)
- Find Tilt Range (Martin Schorb)
- Quick Tomography (Martin Schorb)
Single Particle
- Zero Loss Settings (Jan Rheinberger)
- test hole centering (Wim Hagen)
- Parameters Script JEOL CryoARM (Marcus Fislage)
- LD (Henning Stahlberg)
- Manual Acquisition (Juha Huiskonen)
- Intensity Zero (Jan Rheinberger)
- Set Target for Sample Thickness (Jan Rheinberger)
- SPA multiple images (Wim Hagen)
- Test shots JEOL CryoARM300 (semi-automated) (Marcus Fislage)
- SPA data collection on JEOL CryoARM300 (Marcus Fislage)
- Parameters (Henning Stahlberg)
- SPAK2aligntomap (Wim Hagen)
- Tilt Pair (Juha Huiskonen)
- Auto Acquire on Holey Carbon (Juha Huiskonen)
- Measure Sample Thickness (ALS) (Jan Rheinberger)
- Measure Sample Thickness (Jan Rheinberger)
- SPA multiple images Test Radius (Wim Hagen)
- Functions for JEOL CryoARM300 (Marcus Fislage)
- Measure Sample Thickness (LM) (Jan Rheinberger)
Other Data Acquisition
- Continuous image acquisition (Jason de la Cruz)
- CRmov (Jason de la Cruz)
- Check grid (Jason de la Cruz)
- Random Grid Sampler (Guenter Resch)
- Serial Section Maps (Martin Schorb)
- Prepare gridsquare (set eucentric height) (Jason de la Cruz)
- Acquire image SPIRAL (Francisco Javier Chichón)